Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm25406-201ENSMUST00000157599 105 ntBASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom1Q5SX79 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm4459-201ENSMUST00000118750 468 ntBASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm37935-201ENSMUST00000192012 982 ntBASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom1Q5SX79 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.91■□□□□ 0.3
Shroom1Q5SX79 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.91■□□□□ 0.3
Shroom1Q5SX79 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom1Q5SX79 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Gm8097-201ENSMUST00000117903 829 ntBASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms