Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv4Q5R1A3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv4Q5R1A3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv4Q5R1A3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.15□□□□□ -0.3
Trdv4Q5R1A3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms