Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ptchd3Q0EEE2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Gm2274-201ENSMUST00000184539 609 ntBASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ptchd3Q0EEE2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Gm13559-201ENSMUST00000120476 863 ntBASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Gm43799-201ENSMUST00000201845 579 ntBASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ptchd3Q0EEE2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Gm7370-201ENSMUST00000219471 767 ntBASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptchd3Q0EEE2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms