Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc1P97496 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Smarcc1P97496 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.86■□□□□ 0.77
Smarcc1P97496 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smarcc1P97496 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.86■□□□□ 0.77
Smarcc1P97496 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Gm15427-201ENSMUST00000117288 531 ntBASIC19.86■□□□□ 0.77
Smarcc1P97496 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.86■□□□□ 0.77
Smarcc1P97496 Gm13365-201ENSMUST00000121188 973 ntBASIC19.86■□□□□ 0.77
Smarcc1P97496 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.86■□□□□ 0.77
Smarcc1P97496 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarcc1P97496 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smarcc1P97496 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smarcc1P97496 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc1P97496 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smarcc1P97496 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smarcc1P97496 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smarcc1P97496 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.85■□□□□ 0.77
Smarcc1P97496 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.85■□□□□ 0.77
Smarcc1P97496 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Smarcc1P97496 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.85■□□□□ 0.77
Smarcc1P97496 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.85■□□□□ 0.77
Smarcc1P97496 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.85■□□□□ 0.77
Smarcc1P97496 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc1P97496 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.84■□□□□ 0.77
Smarcc1P97496 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.84■□□□□ 0.77
Smarcc1P97496 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.84■□□□□ 0.77
Smarcc1P97496 Gm5177-201ENSMUST00000183092 997 ntBASIC19.84■□□□□ 0.77
Smarcc1P97496 Gm45612-201ENSMUST00000211320 160 ntBASIC19.84■□□□□ 0.77
Smarcc1P97496 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smarcc1P97496 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smarcc1P97496 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.84■□□□□ 0.77
Smarcc1P97496 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Smarcc1P97496 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc1P97496 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc1P97496 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smarcc1P97496 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc1P97496 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc1P97496 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smarcc1P97496 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc1P97496 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smarcc1P97496 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smarcc1P97496 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.83■□□□□ 0.77
Smarcc1P97496 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.83■□□□□ 0.77
Smarcc1P97496 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.83■□□□□ 0.77
Smarcc1P97496 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc1P97496 Gm27301-201ENSMUST00000184012 127 ntBASIC19.83■□□□□ 0.77
Smarcc1P97496 Gm19164-201ENSMUST00000210667 640 ntBASIC19.83■□□□□ 0.77
Smarcc1P97496 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc1P97496 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc1P97496 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Smarcc1P97496 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.83■□□□□ 0.76
Smarcc1P97496 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc1P97496 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc1P97496 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc1P97496 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc1P97496 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc1P97496 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc1P97496 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Smarcc1P97496 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.83■□□□□ 0.76
Smarcc1P97496 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc1P97496 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms