Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.26□□□□□ -0.29
Pdlim4P70271 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim4P70271 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.26□□□□□ -0.29
Pdlim4P70271 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim4P70271 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.26□□□□□ -0.29
Pdlim4P70271 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pdlim4P70271 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pdlim4P70271 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim4P70271 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim4P70271 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdlim4P70271 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim4P70271 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Olfr129-201ENSMUST00000122318 993 ntBASIC13.25□□□□□ -0.29
Pdlim4P70271 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.25□□□□□ -0.29
Pdlim4P70271 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pdlim4P70271 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdlim4P70271 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim4P70271 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim4P70271 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim4P70271 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.24□□□□□ -0.29
Pdlim4P70271 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pdlim4P70271 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Mir3081-201ENSMUST00000175305 84 ntBASIC13.24□□□□□ -0.29
Pdlim4P70271 Gm17807-201ENSMUST00000186869 298 ntBASIC13.24□□□□□ -0.29
Pdlim4P70271 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms