Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.71■□□□□ 0.11
Traf6P70196 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Traf6P70196 Gm21559-201ENSMUST00000220638 855 ntBASIC15.71■□□□□ 0.11
Traf6P70196 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Traf6P70196 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Traf6P70196 Gm8587-201ENSMUST00000076538 843 ntBASIC15.71■□□□□ 0.11
Traf6P70196 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Traf6P70196 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Traf6P70196 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Traf6P70196 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Traf6P70196 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Traf6P70196 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Traf6P70196 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Traf6P70196 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Traf6P70196 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.71■□□□□ 0.1
Traf6P70196 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Traf6P70196 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Traf6P70196 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.7■□□□□ 0.1
Traf6P70196 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.7■□□□□ 0.1
Traf6P70196 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Traf6P70196 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.7■□□□□ 0.1
Traf6P70196 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Traf6P70196 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Traf6P70196 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Traf6P70196 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.69■□□□□ 0.1
Traf6P70196 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.69■□□□□ 0.1
Traf6P70196 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.69■□□□□ 0.1
Traf6P70196 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.69■□□□□ 0.1
Traf6P70196 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Traf6P70196 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Traf6P70196 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Traf6P70196 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Traf6P70196 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.68■□□□□ 0.1
Traf6P70196 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Traf6P70196 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Traf6P70196 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.68■□□□□ 0.1
Traf6P70196 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.68■□□□□ 0.1
Traf6P70196 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.68■□□□□ 0.1
Traf6P70196 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Traf6P70196 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Traf6P70196 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Traf6P70196 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.67■□□□□ 0.1
Traf6P70196 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms