Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.28□□□□□ -0.44
Vamp3P63024 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.28□□□□□ -0.44
Vamp3P63024 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vamp3P63024 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vamp3P63024 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vamp3P63024 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp3P63024 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.27□□□□□ -0.44
Vamp3P63024 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vamp3P63024 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vamp3P63024 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vamp3P63024 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vamp3P63024 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vamp3P63024 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vamp3P63024 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Vamp3P63024 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Vamp3P63024 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vamp3P63024 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Vamp3P63024 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.27□□□□□ -0.45
Vamp3P63024 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vamp3P63024 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Vamp3P63024 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.27□□□□□ -0.45
Vamp3P63024 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.27□□□□□ -0.45
Vamp3P63024 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vamp3P63024 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vamp3P63024 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vamp3P63024 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
Vamp3P63024 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vamp3P63024 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.26□□□□□ -0.45
Vamp3P63024 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Vamp3P63024 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Vamp3P63024 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vamp3P63024 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.26□□□□□ -0.45
Vamp3P63024 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vamp3P63024 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vamp3P63024 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Vamp3P63024 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Vamp3P63024 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.25□□□□□ -0.45
Vamp3P63024 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vamp3P63024 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms