Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.8■□□□□ 0.44
Tpm1P58771 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.8■□□□□ 0.44
Tpm1P58771 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tpm1P58771 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.8■□□□□ 0.44
Tpm1P58771 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Tpm1P58771 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm1P58771 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Tpm1P58771 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.79■□□□□ 0.44
Tpm1P58771 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.79■□□□□ 0.44
Tpm1P58771 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.79■□□□□ 0.44
Tpm1P58771 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Gm18115-201ENSMUST00000221209 621 ntBASIC17.79■□□□□ 0.44
Tpm1P58771 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm1P58771 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Tpm1P58771 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tpm1P58771 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tpm1P58771 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tpm1P58771 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.78■□□□□ 0.44
Tpm1P58771 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm1P58771 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tpm1P58771 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tpm1P58771 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.77■□□□□ 0.44
Tpm1P58771 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tpm1P58771 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tpm1P58771 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm1P58771 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Tpm1P58771 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Tpm1P58771 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpm1P58771 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.76■□□□□ 0.43
Tpm1P58771 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.76■□□□□ 0.43
Tpm1P58771 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tpm1P58771 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tpm1P58771 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.76■□□□□ 0.43
Tpm1P58771 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tpm1P58771 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tpm1P58771 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.76■□□□□ 0.43
Tpm1P58771 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms