Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm7506-201ENSMUST00000207758 815 ntBASIC14.27□□□□□ -0.13
Cldn18P56857 Gm9172-201ENSMUST00000212092 954 ntBASIC14.27□□□□□ -0.13
Cldn18P56857 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Cldn18P56857 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldn18P56857 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldn18P56857 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.27□□□□□ -0.13
Cldn18P56857 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.27□□□□□ -0.13
Cldn18P56857 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cldn18P56857 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cldn18P56857 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cldn18P56857 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.26□□□□□ -0.13
Cldn18P56857 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.26□□□□□ -0.13
Cldn18P56857 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Gm6257-201ENSMUST00000163864 910 ntBASIC14.26□□□□□ -0.13
Cldn18P56857 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cldn18P56857 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.26□□□□□ -0.13
Cldn18P56857 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cldn18P56857 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn18P56857 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.25□□□□□ -0.13
Cldn18P56857 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.25□□□□□ -0.13
Cldn18P56857 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.25□□□□□ -0.13
Cldn18P56857 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.25□□□□□ -0.13
Cldn18P56857 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn18P56857 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn18P56857 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Cldn18P56857 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn18P56857 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cldn18P56857 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cldn18P56857 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Birc2-201ENSMUST00000054878 378 ntBASIC14.24□□□□□ -0.13
Cldn18P56857 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldn18P56857 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn18P56857 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn18P56857 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn18P56857 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.23□□□□□ -0.13
Cldn18P56857 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms