Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf5P56477 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Irf5P56477 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Irf5P56477 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Irf5P56477 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.82■□□□□ 0.6
Irf5P56477 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.82■□□□□ 0.6
Irf5P56477 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.82■□□□□ 0.6
Irf5P56477 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Irf5P56477 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Irf5P56477 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf5P56477 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Gm27702-201ENSMUST00000184512 56 ntBASIC18.81■□□□□ 0.6
Irf5P56477 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.81■□□□□ 0.6
Irf5P56477 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.81■□□□□ 0.6
Irf5P56477 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Irf5P56477 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Prob1-201ENSMUST00000097619 3021 ntBASIC18.8■□□□□ 0.6
Irf5P56477 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Irf5P56477 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.8■□□□□ 0.6
Irf5P56477 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.8■□□□□ 0.6
Irf5P56477 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Irf5P56477 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.8■□□□□ 0.6
Irf5P56477 Psmb5-202ENSMUST00000227257 622 ntBASIC18.8■□□□□ 0.6
Irf5P56477 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Irf5P56477 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Irf5P56477 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.8■□□□□ 0.6
Irf5P56477 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf5P56477 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Irf5P56477 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Gm15467-201ENSMUST00000120582 445 ntBASIC18.79■□□□□ 0.6
Irf5P56477 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.79■□□□□ 0.6
Irf5P56477 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Irf5P56477 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Irf5P56477 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.79■□□□□ 0.6
Irf5P56477 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf5P56477 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.79■□□□□ 0.6
Irf5P56477 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Irf5P56477 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Irf5P56477 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.79■□□□□ 0.6
Irf5P56477 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Irf5P56477 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Irf5P56477 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf5P56477 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf5P56477 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Irf5P56477 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Irf5P56477 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms