Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LtbrP50284 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.65■□□□□ 0.58
LtbrP50284 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
LtbrP50284 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.65■□□□□ 0.58
LtbrP50284 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.65■□□□□ 0.58
LtbrP50284 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LtbrP50284 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.65■□□□□ 0.58
LtbrP50284 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.65■□□□□ 0.58
LtbrP50284 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LtbrP50284 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbrP50284 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LtbrP50284 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LtbrP50284 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LtbrP50284 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
LtbrP50284 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LtbrP50284 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.64■□□□□ 0.57
LtbrP50284 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LtbrP50284 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
LtbrP50284 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LtbrP50284 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LtbrP50284 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
LtbrP50284 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.64■□□□□ 0.57
LtbrP50284 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbrP50284 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Gm11764-201ENSMUST00000120221 623 ntBASIC18.63■□□□□ 0.57
LtbrP50284 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LtbrP50284 Gm9172-201ENSMUST00000212092 954 ntBASIC18.63■□□□□ 0.57
LtbrP50284 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LtbrP50284 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LtbrP50284 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.63■□□□□ 0.57
LtbrP50284 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LtbrP50284 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.63■□□□□ 0.57
LtbrP50284 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LtbrP50284 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.63■□□□□ 0.57
LtbrP50284 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LtbrP50284 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LtbrP50284 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LtbrP50284 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LtbrP50284 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LtbrP50284 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LtbrP50284 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.62■□□□□ 0.57
LtbrP50284 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LtbrP50284 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms