Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox18P43680 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Sox18P43680 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox18P43680 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox18P43680 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox18P43680 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox18P43680 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox18P43680 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox18P43680 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Sox18P43680 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox18P43680 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sox18P43680 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox18P43680 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Gm25406-201ENSMUST00000157599 105 ntBASIC15.22■□□□□ 0.03
Sox18P43680 Gm5682-201ENSMUST00000173402 505 ntBASIC15.22■□□□□ 0.03
Sox18P43680 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox18P43680 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.22■□□□□ 0.03
Sox18P43680 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox18P43680 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox18P43680 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox18P43680 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sox18P43680 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.21■□□□□ 0.03
Sox18P43680 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sox18P43680 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Gm5312-201ENSMUST00000203728 547 ntBASIC15.21■□□□□ 0.03
Sox18P43680 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.21■□□□□ 0.03
Sox18P43680 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sox18P43680 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox18P43680 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox18P43680 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox18P43680 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox18P43680 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox18P43680 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox18P43680 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sox18P43680 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sox18P43680 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox18P43680 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.2■□□□□ 0.02
Sox18P43680 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sox18P43680 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox18P43680 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox18P43680 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms