Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.51□□□□□ -0.25
Hist1h1dP43277 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Gm10566-201ENSMUST00000086739 996 ntBASIC13.51□□□□□ -0.25
Hist1h1dP43277 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h1dP43277 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hist1h1dP43277 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.49□□□□□ -0.25
Hist1h1dP43277 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hist1h1dP43277 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h1dP43277 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms