Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15□□□□□ -0.01
Sox6P40645 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15□□□□□ -0.01
Sox6P40645 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sox6P40645 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15□□□□□ -0.01
Sox6P40645 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15□□□□□ -0.01
Sox6P40645 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15□□□□□ -0.01
Sox6P40645 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15□□□□□ -0.01
Sox6P40645 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sox6P40645 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sox6P40645 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox6P40645 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.99□□□□□ -0.01
Sox6P40645 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Prob1-201ENSMUST00000097619 3021 ntBASIC14.99□□□□□ -0.01
Sox6P40645 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Gm10013-201ENSMUST00000106074 672 ntBASIC14.99□□□□□ -0.01
Sox6P40645 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.99□□□□□ -0.01
Sox6P40645 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.99□□□□□ -0.01
Sox6P40645 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.99□□□□□ -0.01
Sox6P40645 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox6P40645 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox6P40645 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox6P40645 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox6P40645 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Sox6P40645 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox6P40645 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox6P40645 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox6P40645 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox6P40645 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
Sox6P40645 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox6P40645 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sox6P40645 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox6P40645 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sox6P40645 Actl10-202ENSMUST00000226583 1501 ntBASIC14.97□□□□□ -0.01
Sox6P40645 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Sox6P40645 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Sox6P40645 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms