Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Gm18421-201ENSMUST00000204122 625 ntBASIC15.87■□□□□ 0.13
LdlrP35951 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.87■□□□□ 0.13
LdlrP35951 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LdlrP35951 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.87■□□□□ 0.13
LdlrP35951 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LdlrP35951 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.86■□□□□ 0.13
LdlrP35951 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.86■□□□□ 0.13
LdlrP35951 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.86■□□□□ 0.13
LdlrP35951 Gm17807-201ENSMUST00000186869 298 ntBASIC15.86■□□□□ 0.13
LdlrP35951 Gm29518-201ENSMUST00000190858 372 ntBASIC15.86■□□□□ 0.13
LdlrP35951 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LdlrP35951 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LdlrP35951 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LdlrP35951 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.85■□□□□ 0.13
LdlrP35951 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.85■□□□□ 0.13
LdlrP35951 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.85■□□□□ 0.13
LdlrP35951 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.85■□□□□ 0.13
LdlrP35951 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.85■□□□□ 0.13
LdlrP35951 Gm7370-201ENSMUST00000219471 767 ntBASIC15.85■□□□□ 0.13
LdlrP35951 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.85■□□□□ 0.13
LdlrP35951 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LdlrP35951 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LdlrP35951 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.84■□□□□ 0.13
LdlrP35951 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Gm18669-201ENSMUST00000216049 778 ntBASIC15.84■□□□□ 0.13
LdlrP35951 Gm7461-201ENSMUST00000058918 827 ntBASIC15.84■□□□□ 0.13
LdlrP35951 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LdlrP35951 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms