Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hes1P35428 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hes1P35428 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hes1P35428 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Hes1P35428 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.16□□□□□ -0.3
Hes1P35428 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Hes1P35428 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hes1P35428 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hes1P35428 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hes1P35428 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hes1P35428 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.16□□□□□ -0.3
Hes1P35428 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hes1P35428 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hes1P35428 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hes1P35428 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Gm17808-201ENSMUST00000200859 894 ntBASIC13.15□□□□□ -0.3
Hes1P35428 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Hes1P35428 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hes1P35428 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hes1P35428 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hes1P35428 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.14□□□□□ -0.31
Hes1P35428 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Gm11950-201ENSMUST00000121615 838 ntBASIC13.14□□□□□ -0.31
Hes1P35428 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.14□□□□□ -0.31
Hes1P35428 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.14□□□□□ -0.31
Hes1P35428 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.14□□□□□ -0.31
Hes1P35428 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.14□□□□□ -0.31
Hes1P35428 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hes1P35428 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hes1P35428 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hes1P35428 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Hes1P35428 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hes1P35428 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hes1P35428 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hes1P35428 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hes1P35428 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms