Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.82□□□□□ -0.04
Nedd8P29595 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd8P29595 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nedd8P29595 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nedd8P29595 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nedd8P29595 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.81□□□□□ -0.04
Nedd8P29595 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.81□□□□□ -0.04
Nedd8P29595 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nedd8P29595 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.81□□□□□ -0.04
Nedd8P29595 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Nedd8P29595 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Nedd8P29595 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd8P29595 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.8□□□□□ -0.04
Nedd8P29595 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.8□□□□□ -0.04
Nedd8P29595 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Nedd8P29595 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nedd8P29595 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Nedd8P29595 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nedd8P29595 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd8P29595 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Nedd8P29595 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.79□□□□□ -0.04
Nedd8P29595 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nedd8P29595 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.79□□□□□ -0.04
Nedd8P29595 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Gm17661-201ENSMUST00000170317 270 ntBASIC14.79□□□□□ -0.04
Nedd8P29595 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.79□□□□□ -0.04
Nedd8P29595 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nedd8P29595 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd8P29595 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.79□□□□□ -0.04
Nedd8P29595 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.78□□□□□ -0.04
Nedd8P29595 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nedd8P29595 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Gm24841-201ENSMUST00000158676 357 ntBASIC14.78□□□□□ -0.04
Nedd8P29595 Gm6211-202ENSMUST00000167849 925 ntBASIC14.78□□□□□ -0.04
Nedd8P29595 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nedd8P29595 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nedd8P29595 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nedd8P29595 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms