Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.74□□□□□ -0.05
Tnfrsf1bP25119 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Gm25406-201ENSMUST00000157599 105 ntBASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfrsf1bP25119 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Gm24589-201ENSMUST00000116692 94 ntBASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tnfrsf1bP25119 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Gm34391-201ENSMUST00000203706 907 ntBASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 163.2 ms