Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P20040 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.19□□□□□ -0.14
P20040 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
P20040 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P20040 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P20040 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P20040 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
P20040 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.18□□□□□ -0.14
P20040 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P20040 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P20040 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.18□□□□□ -0.14
P20040 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.18□□□□□ -0.14
P20040 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P20040 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.18□□□□□ -0.14
P20040 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P20040 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P20040 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P20040 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.18□□□□□ -0.14
P20040 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
P20040 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P20040 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P20040 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P20040 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
P20040 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P20040 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.17□□□□□ -0.14
P20040 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P20040 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P20040 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
P20040 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P20040 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P20040 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P20040 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
P20040 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.16□□□□□ -0.14
P20040 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.16□□□□□ -0.14
P20040 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
P20040 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
P20040 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
P20040 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.16□□□□□ -0.14
P20040 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
P20040 Gm13186-201ENSMUST00000118031 316 ntBASIC14.16□□□□□ -0.14
P20040 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.16□□□□□ -0.14
P20040 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.16□□□□□ -0.14
P20040 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P20040 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms