Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Hoxc9P09633 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.57■□□□□ 0.88
Hoxc9P09633 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hoxc9P09633 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.57■□□□□ 0.88
Hoxc9P09633 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.57■□□□□ 0.88
Hoxc9P09633 Gm8396-201ENSMUST00000057361 823 ntBASIC20.57■□□□□ 0.88
Hoxc9P09633 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hoxc9P09633 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.57■□□□□ 0.88
Hoxc9P09633 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.56■□□□□ 0.88
Hoxc9P09633 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Hoxc9P09633 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.56■□□□□ 0.88
Hoxc9P09633 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hoxc9P09633 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.56■□□□□ 0.88
Hoxc9P09633 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hoxc9P09633 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc9P09633 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hoxc9P09633 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hoxc9P09633 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Hoxc9P09633 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.55■□□□□ 0.88
Hoxc9P09633 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc9P09633 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Hoxc9P09633 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Gm15427-201ENSMUST00000117288 531 ntBASIC20.54■□□□□ 0.88
Hoxc9P09633 Gm15920-201ENSMUST00000118998 402 ntBASIC20.54■□□□□ 0.88
Hoxc9P09633 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.54■□□□□ 0.88
Hoxc9P09633 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.54■□□□□ 0.88
Hoxc9P09633 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Gm27494-201ENSMUST00000184735 189 ntBASIC20.54■□□□□ 0.88
Hoxc9P09633 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.54■□□□□ 0.88
Hoxc9P09633 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.54■□□□□ 0.88
Hoxc9P09633 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.54■□□□□ 0.88
Hoxc9P09633 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.54■□□□□ 0.88
Hoxc9P09633 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hoxc9P09633 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc9P09633 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.53■□□□□ 0.88
Hoxc9P09633 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hoxc9P09633 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Hoxc9P09633 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Hoxc9P09633 Gm45612-201ENSMUST00000211320 160 ntBASIC20.53■□□□□ 0.88
Hoxc9P09633 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hoxc9P09633 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Hoxc9P09633 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.53■□□□□ 0.88
Hoxc9P09633 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc9P09633 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.52■□□□□ 0.88
Hoxc9P09633 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Gm11025-201ENSMUST00000140773 466 ntBASIC20.52■□□□□ 0.88
Hoxc9P09633 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hoxc9P09633 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms