Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
ApoeP08226 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.11■□□□□ 0.01
ApoeP08226 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ApoeP08226 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ApoeP08226 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
ApoeP08226 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ApoeP08226 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.1■□□□□ 0.01
ApoeP08226 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.1■□□□□ 0.01
ApoeP08226 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.1■□□□□ 0.01
ApoeP08226 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ApoeP08226 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.1■□□□□ 0.01
ApoeP08226 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ApoeP08226 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ApoeP08226 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.09■□□□□ 0.01
ApoeP08226 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ApoeP08226 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.09■□□□□ 0.01
ApoeP08226 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.09■□□□□ 0.01
ApoeP08226 Gm29707-201ENSMUST00000196325 491 ntBASIC15.09■□□□□ 0.01
ApoeP08226 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.09■□□□□ 0.01
ApoeP08226 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.09■□□□□ 0.01
ApoeP08226 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.09■□□□□ 0.01
ApoeP08226 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ApoeP08226 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ApoeP08226 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.09■□□□□ 0.01
ApoeP08226 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ApoeP08226 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.09■□□□□ 0.01
ApoeP08226 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ApoeP08226 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ApoeP08226 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ApoeP08226 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.08■□□□□ 0.01
ApoeP08226 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ApoeP08226 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ApoeP08226 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ApoeP08226 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
ApoeP08226 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ApoeP08226 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.08■□□□□ 0
ApoeP08226 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.08■□□□□ 0
ApoeP08226 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.08■□□□□ 0
ApoeP08226 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.08■□□□□ 0
ApoeP08226 Gm3375-201ENSMUST00000203929 796 ntBASIC15.08■□□□□ 0
ApoeP08226 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.08■□□□□ 0
ApoeP08226 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ApoeP08226 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.08■□□□□ 0
ApoeP08226 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.08■□□□□ 0
ApoeP08226 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ApoeP08226 BC037039-201ENSMUST00000192003 2205 ntBASIC15.08■□□□□ 0
ApoeP08226 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms