Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Gm11764-201ENSMUST00000120221 623 ntBASIC13.63□□□□□ -0.23
P04946 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.63□□□□□ -0.23
P04946 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.63□□□□□ -0.23
P04946 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.63□□□□□ -0.23
P04946 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
P04946 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.63□□□□□ -0.23
P04946 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.63□□□□□ -0.23
P04946 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
P04946 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.63□□□□□ -0.23
P04946 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.63□□□□□ -0.23
P04946 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
P04946 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
P04946 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
P04946 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.62□□□□□ -0.23
P04946 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
P04946 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.62□□□□□ -0.23
P04946 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.62□□□□□ -0.23
P04946 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.62□□□□□ -0.23
P04946 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.62□□□□□ -0.23
P04946 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
P04946 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.62□□□□□ -0.23
P04946 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.62□□□□□ -0.23
P04946 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.62□□□□□ -0.23
P04946 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.62□□□□□ -0.23
P04946 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.62□□□□□ -0.23
P04946 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.62□□□□□ -0.23
P04946 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
P04946 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
P04946 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04946 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
P04946 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.61□□□□□ -0.23
P04946 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
P04946 Gm27525-201ENSMUST00000184465 107 ntBASIC13.61□□□□□ -0.23
P04946 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.61□□□□□ -0.23
P04946 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.61□□□□□ -0.23
P04946 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.61□□□□□ -0.23
P04946 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.61□□□□□ -0.23
P04946 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Psmb5-202ENSMUST00000227257 622 ntBASIC13.61□□□□□ -0.23
P04946 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
P04946 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.61□□□□□ -0.23
P04946 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04946 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms