Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01878 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01878 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.32■□□□□ 0.2
P01878 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
P01878 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
P01878 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.31■□□□□ 0.2
P01878 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
P01878 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.31■□□□□ 0.2
P01878 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.31■□□□□ 0.2
P01878 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.31■□□□□ 0.2
P01878 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01878 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
P01878 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
P01878 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
P01878 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.3■□□□□ 0.2
P01878 Gm5177-201ENSMUST00000183092 997 ntBASIC16.3■□□□□ 0.2
P01878 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.3■□□□□ 0.2
P01878 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.3■□□□□ 0.2
P01878 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01878 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
P01878 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
P01878 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
P01878 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.29■□□□□ 0.2
P01878 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
P01878 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.29■□□□□ 0.2
P01878 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.29■□□□□ 0.2
P01878 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.29■□□□□ 0.2
P01878 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.29■□□□□ 0.2
P01878 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.29■□□□□ 0.2
P01878 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.29■□□□□ 0.2
P01878 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
P01878 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01878 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.28■□□□□ 0.2
P01878 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.28■□□□□ 0.2
P01878 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Gm17271-201ENSMUST00000165535 355 ntBASIC16.28■□□□□ 0.2
P01878 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.28■□□□□ 0.2
P01878 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01878 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.28■□□□□ 0.2
P01878 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P01878 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms