Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm15375-201ENSMUST00000119510 849 ntBASIC11.68□□□□□ -0.54
TcraP01849 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.68□□□□□ -0.54
TcraP01849 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
TcraP01849 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Mtag2-201ENSMUST00000058665 714 ntBASIC11.68□□□□□ -0.54
TcraP01849 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
TcraP01849 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.68□□□□□ -0.54
TcraP01849 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Dio3-201ENSMUST00000097228 1449 ntBASIC11.68□□□□□ -0.54
TcraP01849 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
TcraP01849 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.68□□□□□ -0.54
TcraP01849 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TcraP01849 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.67□□□□□ -0.54
TcraP01849 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.67□□□□□ -0.54
TcraP01849 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.67□□□□□ -0.54
TcraP01849 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
TcraP01849 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
TcraP01849 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TcraP01849 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
TcraP01849 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TcraP01849 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TcraP01849 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.66□□□□□ -0.54
TcraP01849 Gm13158-201ENSMUST00000122007 736 ntBASIC11.66□□□□□ -0.54
TcraP01849 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.66□□□□□ -0.54
TcraP01849 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.66□□□□□ -0.54
TcraP01849 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.66□□□□□ -0.54
TcraP01849 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TcraP01849 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TcraP01849 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TcraP01849 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TcraP01849 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TcraP01849 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TcraP01849 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TcraP01849 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TcraP01849 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms