Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.31□□□□□ -0.6
Sh2d1aO88890 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Gm18101-201ENSMUST00000215769 548 ntBASIC11.31□□□□□ -0.6
Sh2d1aO88890 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.31□□□□□ -0.6
Sh2d1aO88890 Gm21559-201ENSMUST00000220638 855 ntBASIC11.31□□□□□ -0.6
Sh2d1aO88890 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Gm8587-201ENSMUST00000076538 843 ntBASIC11.31□□□□□ -0.6
Sh2d1aO88890 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh2d1aO88890 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.29□□□□□ -0.6
Sh2d1aO88890 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.29□□□□□ -0.6
Sh2d1aO88890 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms