Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.3■□□□□ 0.04
Hcn1O88704 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.3■□□□□ 0.04
Hcn1O88704 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Hcn1O88704 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hcn1O88704 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Hcn1O88704 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hcn1O88704 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.29■□□□□ 0.04
Hcn1O88704 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Hcn1O88704 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.29■□□□□ 0.04
Hcn1O88704 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Hcn1O88704 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hcn1O88704 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.29■□□□□ 0.04
Hcn1O88704 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Hcn1O88704 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Gm7284-201ENSMUST00000131667 944 ntBASIC15.29■□□□□ 0.04
Hcn1O88704 Gm18421-201ENSMUST00000204122 625 ntBASIC15.29■□□□□ 0.04
Hcn1O88704 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Hcn1O88704 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Hcn1O88704 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn1O88704 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hcn1O88704 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Hcn1O88704 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hcn1O88704 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Gm14859-201ENSMUST00000117752 357 ntBASIC15.28■□□□□ 0.04
Hcn1O88704 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.28■□□□□ 0.04
Hcn1O88704 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.28■□□□□ 0.04
Hcn1O88704 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Hcn1O88704 Gm29707-201ENSMUST00000196325 491 ntBASIC15.28■□□□□ 0.04
Hcn1O88704 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.28■□□□□ 0.04
Hcn1O88704 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hcn1O88704 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.28■□□□□ 0.04
Hcn1O88704 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn1O88704 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.27■□□□□ 0.04
Hcn1O88704 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hcn1O88704 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hcn1O88704 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Hcn1O88704 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.27■□□□□ 0.04
Hcn1O88704 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.27■□□□□ 0.04
Hcn1O88704 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.27■□□□□ 0.04
Hcn1O88704 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.27■□□□□ 0.04
Hcn1O88704 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.27■□□□□ 0.04
Hcn1O88704 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.27■□□□□ 0.04
Hcn1O88704 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn1O88704 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn1O88704 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn1O88704 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn1O88704 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn1O88704 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn1O88704 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms