Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Psmc3O88685 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.8■□□□□ 0.28
Psmc3O88685 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.8■□□□□ 0.28
Psmc3O88685 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Psmc3O88685 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.8■□□□□ 0.28
Psmc3O88685 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.8■□□□□ 0.28
Psmc3O88685 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Psmc3O88685 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.79■□□□□ 0.28
Psmc3O88685 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.79■□□□□ 0.28
Psmc3O88685 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Psmc3O88685 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.79■□□□□ 0.28
Psmc3O88685 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Psmc3O88685 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.78■□□□□ 0.28
Psmc3O88685 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.78■□□□□ 0.28
Psmc3O88685 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.78■□□□□ 0.28
Psmc3O88685 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Psmc3O88685 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Psmc3O88685 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Psmc3O88685 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Psmc3O88685 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Psmc3O88685 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Psmc3O88685 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.77■□□□□ 0.28
Psmc3O88685 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.77■□□□□ 0.28
Psmc3O88685 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Psmc3O88685 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Psmc3O88685 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Psmc3O88685 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Psmc3O88685 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Psmc3O88685 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Psmc3O88685 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Psmc3O88685 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Psmc3O88685 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Psmc3O88685 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.76■□□□□ 0.27
Psmc3O88685 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.76■□□□□ 0.27
Psmc3O88685 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.76■□□□□ 0.27
Psmc3O88685 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.76■□□□□ 0.27
Psmc3O88685 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Psmc3O88685 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Psmc3O88685 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Psmc3O88685 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Psmc3O88685 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Psmc3O88685 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms