Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ubr1O70481 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr1O70481 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr1O70481 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ubr1O70481 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Ubr1O70481 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.5■□□□□ 0.87
Ubr1O70481 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ubr1O70481 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr1O70481 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.5■□□□□ 0.87
Ubr1O70481 Gm10499-201ENSMUST00000174094 934 ntBASIC20.5■□□□□ 0.87
Ubr1O70481 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr1O70481 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ubr1O70481 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr1O70481 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr1O70481 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr1O70481 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ubr1O70481 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ubr1O70481 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ubr1O70481 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.49■□□□□ 0.87
Ubr1O70481 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.49■□□□□ 0.87
Ubr1O70481 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ubr1O70481 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ubr1O70481 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
Ubr1O70481 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ubr1O70481 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ubr1O70481 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.49■□□□□ 0.87
Ubr1O70481 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.49■□□□□ 0.87
Ubr1O70481 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr1O70481 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ubr1O70481 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.48■□□□□ 0.87
Ubr1O70481 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ubr1O70481 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.48■□□□□ 0.87
Ubr1O70481 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Ubr1O70481 Rprl2-201ENSMUST00000157150 290 ntBASIC20.48■□□□□ 0.87
Ubr1O70481 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Ubr1O70481 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ubr1O70481 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Ubr1O70481 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.48■□□□□ 0.87
Ubr1O70481 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr1O70481 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Ubr1O70481 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.47■□□□□ 0.87
Ubr1O70481 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ubr1O70481 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.47■□□□□ 0.87
Ubr1O70481 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr1O70481 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.47■□□□□ 0.87
Ubr1O70481 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ubr1O70481 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ubr1O70481 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Ubr1O70481 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.46■□□□□ 0.87
Ubr1O70481 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.46■□□□□ 0.87
Ubr1O70481 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.46■□□□□ 0.87
Ubr1O70481 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.46■□□□□ 0.87
Ubr1O70481 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr1O70481 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ubr1O70481 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ubr1O70481 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Ubr1O70481 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.45■□□□□ 0.86
Ubr1O70481 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms