Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Sigmar1O55242 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sigmar1O55242 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sigmar1O55242 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.04□□□□□ -0.64
Sigmar1O55242 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Gm38205-201ENSMUST00000192243 258 ntBASIC11.04□□□□□ -0.64
Sigmar1O55242 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Golgb1-201ENSMUST00000023534 498 ntBASIC11.04□□□□□ -0.64
Sigmar1O55242 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.04□□□□□ -0.64
Sigmar1O55242 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sigmar1O55242 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.03□□□□□ -0.64
Sigmar1O55242 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms