Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Banf1O54962 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.23■□□□□ 0.19
Banf1O54962 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.23■□□□□ 0.19
Banf1O54962 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Banf1O54962 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Banf1O54962 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.23■□□□□ 0.19
Banf1O54962 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.23■□□□□ 0.19
Banf1O54962 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Banf1O54962 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.23■□□□□ 0.19
Banf1O54962 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Banf1O54962 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Banf1O54962 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Banf1O54962 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Banf1O54962 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.22■□□□□ 0.19
Banf1O54962 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Banf1O54962 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Banf1O54962 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.22■□□□□ 0.19
Banf1O54962 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.22■□□□□ 0.19
Banf1O54962 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Banf1O54962 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.22■□□□□ 0.19
Banf1O54962 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.22■□□□□ 0.19
Banf1O54962 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Banf1O54962 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Banf1O54962 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Banf1O54962 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.21■□□□□ 0.19
Banf1O54962 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Banf1O54962 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.21■□□□□ 0.19
Banf1O54962 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.21■□□□□ 0.19
Banf1O54962 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.21■□□□□ 0.19
Banf1O54962 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.21■□□□□ 0.19
Banf1O54962 Gm21559-201ENSMUST00000220638 855 ntBASIC16.21■□□□□ 0.19
Banf1O54962 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.21■□□□□ 0.19
Banf1O54962 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Gm8587-201ENSMUST00000076538 843 ntBASIC16.21■□□□□ 0.19
Banf1O54962 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.21■□□□□ 0.19
Banf1O54962 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Asic1-205ENSMUST00000228185 1818 ntBASIC16.21■□□□□ 0.19
Banf1O54962 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Banf1O54962 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Banf1O54962 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Banf1O54962 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Banf1O54962 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Banf1O54962 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.2■□□□□ 0.18
Banf1O54962 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Banf1O54962 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Banf1O54962 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms