Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Phf7-203ENSMUST00000226565 1971 ntBASIC14.53□□□□□ -0.08
Matn3O35701 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.53□□□□□ -0.08
Matn3O35701 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Gm5643-201ENSMUST00000117081 966 ntBASIC14.53□□□□□ -0.08
Matn3O35701 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.53□□□□□ -0.08
Matn3O35701 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.53□□□□□ -0.08
Matn3O35701 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Matn3O35701 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Matn3O35701 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Matn3O35701 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Matn3O35701 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Matn3O35701 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Matn3O35701 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.52□□□□□ -0.08
Matn3O35701 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Matn3O35701 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Matn3O35701 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Matn3O35701 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Matn3O35701 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.52□□□□□ -0.09
Matn3O35701 Gm42545-201ENSMUST00000202755 922 ntBASIC14.52□□□□□ -0.09
Matn3O35701 Gm18025-201ENSMUST00000221733 862 ntBASIC14.52□□□□□ -0.09
Matn3O35701 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Matn3O35701 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Matn3O35701 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.51□□□□□ -0.09
Matn3O35701 Dio3-201ENSMUST00000097228 1449 ntBASIC14.51□□□□□ -0.09
Matn3O35701 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Matn3O35701 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.51□□□□□ -0.09
Matn3O35701 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Matn3O35701 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Matn3O35701 Mir7071-201ENSMUST00000184847 69 ntBASIC14.51□□□□□ -0.09
Matn3O35701 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.51□□□□□ -0.09
Matn3O35701 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Matn3O35701 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Matn3O35701 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Matn3O35701 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.5□□□□□ -0.09
Matn3O35701 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Matn3O35701 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.5□□□□□ -0.09
Matn3O35701 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.5□□□□□ -0.09
Matn3O35701 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.5□□□□□ -0.09
Matn3O35701 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.5□□□□□ -0.09
Matn3O35701 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Matn3O35701 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Matn3O35701 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Matn3O35701 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Matn3O35701 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms