Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.89□□□□□ -0.03
Abca4O35600 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.88□□□□□ -0.03
Abca4O35600 Gm9257-201ENSMUST00000221254 232 ntBASIC14.88□□□□□ -0.03
Abca4O35600 Gm9063-201ENSMUST00000223299 582 ntBASIC14.88□□□□□ -0.03
Abca4O35600 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Abca4O35600 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Gm42612-201ENSMUST00000197986 623 ntBASIC14.88□□□□□ -0.03
Abca4O35600 Gm43170-201ENSMUST00000199827 612 ntBASIC14.88□□□□□ -0.03
Abca4O35600 Gm45331-201ENSMUST00000209868 554 ntBASIC14.88□□□□□ -0.03
Abca4O35600 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.88□□□□□ -0.03
Abca4O35600 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.88□□□□□ -0.03
Abca4O35600 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abca4O35600 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.88□□□□□ -0.03
Abca4O35600 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.87□□□□□ -0.03
Abca4O35600 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Abca4O35600 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Gm17150-201ENSMUST00000165577 381 ntBASIC14.87□□□□□ -0.03
Abca4O35600 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Gm25144-201ENSMUST00000179561 110 ntBASIC14.87□□□□□ -0.03
Abca4O35600 Gm25352-201ENSMUST00000179815 110 ntBASIC14.87□□□□□ -0.03
Abca4O35600 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Abca4O35600 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.87□□□□□ -0.03
Abca4O35600 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Abca4O35600 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Abca4O35600 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Abca4O35600 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.87□□□□□ -0.03
Abca4O35600 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.87□□□□□ -0.03
Abca4O35600 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Abca4O35600 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Abca4O35600 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.86□□□□□ -0.03
Abca4O35600 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.86□□□□□ -0.03
Abca4O35600 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.86□□□□□ -0.03
Abca4O35600 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Abca4O35600 Gm11425-201ENSMUST00000119608 498 ntBASIC14.86□□□□□ -0.03
Abca4O35600 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Gm27838-201ENSMUST00000184829 128 ntBASIC14.86□□□□□ -0.03
Abca4O35600 Gm9396-201ENSMUST00000076703 567 ntBASIC14.86□□□□□ -0.03
Abca4O35600 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Abca4O35600 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Abca4O35600 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.86□□□□□ -0.03
Abca4O35600 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.86□□□□□ -0.03
Abca4O35600 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.86□□□□□ -0.03
Abca4O35600 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms