Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.3■□□□□ 0.2
Ptch2O35595 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ptch2O35595 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.3■□□□□ 0.2
Ptch2O35595 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.3■□□□□ 0.2
Ptch2O35595 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.3■□□□□ 0.2
Ptch2O35595 Mir6404-201ENSMUST00000183699 94 ntBASIC16.3■□□□□ 0.2
Ptch2O35595 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.3■□□□□ 0.2
Ptch2O35595 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ptch2O35595 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.29■□□□□ 0.2
Ptch2O35595 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.29■□□□□ 0.2
Ptch2O35595 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.29■□□□□ 0.2
Ptch2O35595 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.29■□□□□ 0.2
Ptch2O35595 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ptch2O35595 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ptch2O35595 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ptch2O35595 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.28■□□□□ 0.2
Ptch2O35595 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ptch2O35595 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.28■□□□□ 0.2
Ptch2O35595 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ptch2O35595 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ptch2O35595 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ptch2O35595 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ptch2O35595 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.27■□□□□ 0.2
Ptch2O35595 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Ptch2O35595 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Gm14494-201ENSMUST00000118786 435 ntBASIC16.27■□□□□ 0.2
Ptch2O35595 Gm14140-201ENSMUST00000119999 995 ntBASIC16.27■□□□□ 0.2
Ptch2O35595 Gm27646-201ENSMUST00000183989 110 ntBASIC16.27■□□□□ 0.2
Ptch2O35595 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Gm18622-201ENSMUST00000219361 595 ntBASIC16.27■□□□□ 0.2
Ptch2O35595 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptch2O35595 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptch2O35595 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ptch2O35595 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptch2O35595 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptch2O35595 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ptch2O35595 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Ptch2O35595 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms