Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Gm13365-201ENSMUST00000121188 973 ntBASIC19.09■□□□□ 0.65
NpcdF8VQB8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.09■□□□□ 0.65
NpcdF8VQB8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.08■□□□□ 0.65
NpcdF8VQB8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.08■□□□□ 0.65
NpcdF8VQB8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.08■□□□□ 0.65
NpcdF8VQB8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NpcdF8VQB8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Gm8825-201ENSMUST00000182565 998 ntBASIC19.08■□□□□ 0.64
NpcdF8VQB8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.08■□□□□ 0.64
NpcdF8VQB8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NpcdF8VQB8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.07■□□□□ 0.64
NpcdF8VQB8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.07■□□□□ 0.64
NpcdF8VQB8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NpcdF8VQB8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Gm15427-201ENSMUST00000117288 531 ntBASIC19.06■□□□□ 0.64
NpcdF8VQB8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.06■□□□□ 0.64
NpcdF8VQB8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.06■□□□□ 0.64
NpcdF8VQB8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.06■□□□□ 0.64
NpcdF8VQB8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.06■□□□□ 0.64
NpcdF8VQB8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NpcdF8VQB8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms