Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh9F8VPK8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh9F8VPK8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdh9F8VPK8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh9F8VPK8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms