Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d4bA6X942 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Gm44430-201ENSMUST00000203376 995 ntBASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d4bA6X942 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Gm23935-201ENSMUST00000102303 57 ntBASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Gm24270-201ENSMUST00000102326 57 ntBASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Gm24245-201ENSMUST00000157318 57 ntBASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Gm7230-201ENSMUST00000173026 815 ntBASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d4bA6X942 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d4bA6X942 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Dancr-204ENSMUST00000132389 2347 ntBASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Gm12260-201ENSMUST00000122447 411 ntBASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Gm24513-201ENSMUST00000174964 138 ntBASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Gm27397-201ENSMUST00000184997 107 ntBASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d4bA6X942 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms