Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.64■□□□□ 0.25
Scn1aA2APX8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Scn1aA2APX8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.64■□□□□ 0.25
Scn1aA2APX8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Gm1401-201ENSMUST00000122048 772 ntBASIC16.63■□□□□ 0.25
Scn1aA2APX8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Gm5364-201ENSMUST00000216789 889 ntBASIC16.63■□□□□ 0.25
Scn1aA2APX8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.63■□□□□ 0.25
Scn1aA2APX8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn1aA2APX8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.62■□□□□ 0.25
Scn1aA2APX8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn1aA2APX8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Psmb5-202ENSMUST00000227257 622 ntBASIC16.61■□□□□ 0.25
Scn1aA2APX8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn1aA2APX8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn1aA2APX8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Gm7222-201ENSMUST00000117512 906 ntBASIC16.6■□□□□ 0.25
Scn1aA2APX8 Gm15358-201ENSMUST00000119249 520 ntBASIC16.6■□□□□ 0.25
Scn1aA2APX8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Gm19164-201ENSMUST00000210667 640 ntBASIC16.6■□□□□ 0.25
Scn1aA2APX8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Gm14140-201ENSMUST00000119999 995 ntBASIC16.6■□□□□ 0.25
Scn1aA2APX8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms