Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm11249-201ENSMUST00000117071 859 ntBASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9d-4A0A0G2JG37 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm37292-201ENSMUST00000192062 758 ntBASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Wnt10b-204ENSMUST00000226655 1807 ntBASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms