Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm4217-201ENSMUST00000182243 1002 ntBASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm27463-201ENSMUST00000183569 57 ntBASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm3375-201ENSMUST00000203929 796 ntBASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm42901-201ENSMUST00000197735 3171 ntBASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Odf3b-204ENSMUST00000227834 930 ntBASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 App-207ENSMUST00000227737 2827 ntBASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms