Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm24841-201ENSMUST00000158676 357 ntBASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm17661-201ENSMUST00000170317 270 ntBASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm42545-201ENSMUST00000202755 922 ntBASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms