Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sirpb1aA0A0A6YYP6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Sybu-209ENSMUST00000228639 4113 ntBASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.13■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms