Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ighv1-56A0A0A6YXG2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.73□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ighv1-56A0A0A6YXG2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms