Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6d-5A0A075B6B9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Trav6d-5A0A075B6B9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6d-5A0A075B6B9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6d-5A0A075B6B9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm5643-201ENSMUST00000117081 966 ntBASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm10698-201ENSMUST00000182663 604 ntBASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Timm23-208ENSMUST00000226683 750 ntBASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-5A0A075B6B9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm11539-201ENSMUST00000119837 557 ntBASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm29707-201ENSMUST00000196325 491 ntBASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Trmt13-210ENSMUST00000198454 880 ntBASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-5A0A075B6B9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm37856-201ENSMUST00000191634 999 ntBASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-5A0A075B6B9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms