Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-4A0A075B652 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gm6433-201ENSMUST00000118634 875 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gm22697-201ENSMUST00000175194 63 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gm36967-201ENSMUST00000193814 266 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-4A0A075B652 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav5-4A0A075B652 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav5-4A0A075B652 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trav5-4A0A075B652 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms