Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Gm42642-201ENSMUST00000200683 355 ntBASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav8-1A0A075B641 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Flg-201ENSMUST00000050758 1488 ntBASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Zfp783-201ENSMUST00000095946 670 ntBASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav8-1A0A075B641 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Gm7291-201ENSMUST00000199147 382 ntBASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav8-1A0A075B641 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms