Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm42545-201ENSMUST00000202755 922 ntBASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16d-dv11A0A075B617 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16d-dv11A0A075B617 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm18958-201ENSMUST00000174258 762 ntBASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16d-dv11A0A075B617 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms