Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Gm17808-201ENSMUST00000200859 894 ntBASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav1A0A075B5Z4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Gm15794-201ENSMUST00000120182 631 ntBASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Gm25016-201ENSMUST00000158399 131 ntBASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Gm29518-201ENSMUST00000190858 372 ntBASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav1A0A075B5Z4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms