Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.33□□□□□ -2.62
VSX1Q9NZR4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.33□□□□□ -2.62
VSX1Q9NZR4 MIR379-201ENST00000362218 67 ntBASIC-1.34□□□□□ -2.62
VSX1Q9NZR4 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.34□□□□□ -2.62
VSX1Q9NZR4 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.34□□□□□ -2.62
VSX1Q9NZR4 RNU6-695P-201ENST00000391157 104 ntBASIC-1.35□□□□□ -2.63
VSX1Q9NZR4 MIR4748-201ENST00000578076 82 ntBASIC-1.35□□□□□ -2.63
VSX1Q9NZR4 U6.97-201ENST00000636904 101 ntBASIC-1.35□□□□□ -2.63
VSX1Q9NZR4 RNU6-841P-201ENST00000383872 107 ntBASIC-1.36□□□□□ -2.63
VSX1Q9NZR4 MIR4317-201ENST00000637586 65 ntBASIC-1.36□□□□□ -2.63
VSX1Q9NZR4 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.38□□□□□ -2.63
VSX1Q9NZR4 RNU6-930P-201ENST00000390938 100 ntBASIC-1.39□□□□□ -2.63
VSX1Q9NZR4 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.4□□□□□ -2.63
VSX1Q9NZR4 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.4□□□□□ -2.63
VSX1Q9NZR4 MIR548W-201ENST00000581970 74 ntBASIC-1.4□□□□□ -2.63
VSX1Q9NZR4 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.4□□□□□ -2.63
VSX1Q9NZR4 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.42□□□□□ -2.64
VSX1Q9NZR4 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.43□□□□□ -2.64
VSX1Q9NZR4 MIR581-201ENST00000384895 96 ntBASIC-1.43□□□□□ -2.64
VSX1Q9NZR4 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.44□□□□□ -2.64
VSX1Q9NZR4 snoU13.10-201ENST00000459301 103 ntBASIC-1.44□□□□□ -2.64
VSX1Q9NZR4 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.45□□□□□ -2.64
VSX1Q9NZR4 MIR5693-201ENST00000577722 73 ntBASIC-1.46□□□□□ -2.64
VSX1Q9NZR4 MIR548F3-201ENST00000408509 87 ntBASIC-1.47□□□□□ -2.64
VSX1Q9NZR4 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.48□□□□□ -2.65
VSX1Q9NZR4 FTX_4.1-201ENST00000616291 147 ntBASIC-1.48□□□□□ -2.65
VSX1Q9NZR4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.49□□□□□ -2.65
VSX1Q9NZR4 RNA5SP106-201ENST00000517274 100 ntBASIC-1.5□□□□□ -2.65
VSX1Q9NZR4 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.51□□□□□ -2.65
VSX1Q9NZR4 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.52□□□□□ -2.65
VSX1Q9NZR4 RNY4P9-201ENST00000363194 97 ntBASIC-1.53□□□□□ -2.65
VSX1Q9NZR4 MIR548H4-201ENST00000408689 111 ntBASIC-1.54□□□□□ -2.66
VSX1Q9NZR4 RNU6-822P-201ENST00000362707 106 ntBASIC-1.56□□□□□ -2.66
VSX1Q9NZR4 RNU6-68P-201ENST00000516576 104 ntBASIC-1.56□□□□□ -2.66
VSX1Q9NZR4 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.57□□□□□ -2.66
VSX1Q9NZR4 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.57□□□□□ -2.66
VSX1Q9NZR4 MIR509-1-201ENST00000385265 94 ntBASIC-1.57□□□□□ -2.66
VSX1Q9NZR4 MIR509-2-201ENST00000390724 91 ntBASIC-1.57□□□□□ -2.66
VSX1Q9NZR4 RNY4P10-201ENST00000365571 96 ntBASIC-1.58□□□□□ -2.66
VSX1Q9NZR4 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.59□□□□□ -2.66
VSX1Q9NZR4 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.59□□□□□ -2.66
VSX1Q9NZR4 AC097484.2-201ENST00000509147 251 ntBASIC-1.59□□□□□ -2.66
VSX1Q9NZR4 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.61□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.61□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.61□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.61□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.61□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.61□□□□□ -2.67
VSX1Q9NZR4 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.62□□□□□ -2.67
VSX1Q9NZR4 SNORD113-3-201ENST00000364830 72 ntBASIC-1.64□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.65□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.65□□□□□ -2.67
VSX1Q9NZR4 RNY4P25-201ENST00000459254 96 ntBASIC-1.65□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.65□□□□□ -2.67
VSX1Q9NZR4 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.67□□□□□ -2.68
VSX1Q9NZR4 RNU6-912P-201ENST00000363800 104 ntBASIC-1.68□□□□□ -2.68
VSX1Q9NZR4 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.68□□□□□ -2.68
VSX1Q9NZR4 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.68□□□□□ -2.68
VSX1Q9NZR4 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.68□□□□□ -2.68
VSX1Q9NZR4 MIR545-201ENST00000385085 106 ntBASIC-1.68□□□□□ -2.68
VSX1Q9NZR4 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.69□□□□□ -2.68
VSX1Q9NZR4 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.7□□□□□ -2.68
VSX1Q9NZR4 SNORD114-13-201ENST00000364377 74 ntBASIC-1.7□□□□□ -2.68
VSX1Q9NZR4 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.7□□□□□ -2.68
VSX1Q9NZR4 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.71□□□□□ -2.68
VSX1Q9NZR4 RNU6-59P-201ENST00000384787 107 ntBASIC-1.71□□□□□ -2.68
VSX1Q9NZR4 AL731768.1-201ENST00000603124 139 ntBASIC-1.72□□□□□ -2.68
VSX1Q9NZR4 RNU6-986P-201ENST00000363133 102 ntBASIC-1.73□□□□□ -2.69
VSX1Q9NZR4 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.74□□□□□ -2.69
VSX1Q9NZR4 RNU6-345P-201ENST00000517001 107 ntBASIC-1.75□□□□□ -2.69
VSX1Q9NZR4 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.76□□□□□ -2.69
VSX1Q9NZR4 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.76□□□□□ -2.69
VSX1Q9NZR4 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.77□□□□□ -2.69
VSX1Q9NZR4 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.77□□□□□ -2.69
VSX1Q9NZR4 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.8□□□□□ -2.7
VSX1Q9NZR4 SNORD115-45-201ENST00000391078 81 ntBASIC-1.81□□□□□ -2.7
VSX1Q9NZR4 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.82□□□□□ -2.7
VSX1Q9NZR4 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.82□□□□□ -2.7
VSX1Q9NZR4 AL359920.1-201ENST00000618332 176 ntBASIC-1.83□□□□□ -2.7
VSX1Q9NZR4 RNU6-665P-201ENST00000384639 107 ntBASIC-1.84□□□□□ -2.7
VSX1Q9NZR4 RNU6-836P-201ENST00000362920 107 ntBASIC-1.86□□□□□ -2.71
VSX1Q9NZR4 SNORD115.2-201ENST00000391126 59 ntBASIC-1.87□□□□□ -2.71
VSX1Q9NZR4 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.87□□□□□ -2.71
VSX1Q9NZR4 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.87□□□□□ -2.71
VSX1Q9NZR4 MIR1254-1-201ENST00000408257 97 ntBASIC-1.88□□□□□ -2.71
VSX1Q9NZR4 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.88□□□□□ -2.71
VSX1Q9NZR4 RNY4P13-201ENST00000384284 96 ntBASIC-1.89□□□□□ -2.71
VSX1Q9NZR4 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.9□□□□□ -2.71
VSX1Q9NZR4 RNA5SP224-201ENST00000365069 126 ntBASIC-1.91□□□□□ -2.72
VSX1Q9NZR4 MIR548AH-201ENST00000637109 76 ntBASIC-1.92□□□□□ -2.72
VSX1Q9NZR4 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.94□□□□□ -2.72
VSX1Q9NZR4 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.94□□□□□ -2.72
VSX1Q9NZR4 RNU6-737P-201ENST00000365370 107 ntBASIC-1.94□□□□□ -2.72
VSX1Q9NZR4 MIR124-1-201ENST00000385275 85 ntBASIC-1.95□□□□□ -2.72
VSX1Q9NZR4 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.97□□□□□ -2.72
VSX1Q9NZR4 RNU6-854P-201ENST00000364036 107 ntBASIC-1.98□□□□□ -2.73
VSX1Q9NZR4 MIR656-201ENST00000385224 78 ntBASIC-1.98□□□□□ -2.73
VSX1Q9NZR4 SNORD45C-201ENST00000383893 79 ntBASIC-2.01□□□□□ -2.73
VSX1Q9NZR4 U6.103-201ENST00000637085 61 ntBASIC-2.03□□□□□ -2.73
VSX1Q9NZR4 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms