Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC009094.1-201ENST00000564443 426 ntBASIC-3.92□□□□□ -3.04
COL12A1Q99715 RNU7-120P-201ENST00000459334 63 ntBASIC-3.92□□□□□ -3.04
COL12A1Q99715 RNU6-200P-201ENST00000364743 107 ntBASIC-3.93□□□□□ -3.04
COL12A1Q99715 RNU6-985P-201ENST00000410182 104 ntBASIC-3.93□□□□□ -3.04
COL12A1Q99715 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.93□□□□□ -3.04
COL12A1Q99715 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.94□□□□□ -3.04
COL12A1Q99715 RNU6-327P-201ENST00000516270 127 ntBASIC-3.94□□□□□ -3.04
COL12A1Q99715 SNORD116-14-201ENST00000383894 92 ntBASIC-3.95□□□□□ -3.04
COL12A1Q99715 SNORD116-17-201ENST00000383929 92 ntBASIC-3.95□□□□□ -3.04
COL12A1Q99715 SNORD116-15-201ENST00000384445 92 ntBASIC-3.95□□□□□ -3.04
COL12A1Q99715 SNORD116-19-201ENST00000384729 92 ntBASIC-3.95□□□□□ -3.04
COL12A1Q99715 MIR450A2-201ENST00000385022 100 ntBASIC-3.95□□□□□ -3.04
COL12A1Q99715 RNU6-111P-201ENST00000517179 105 ntBASIC-3.95□□□□□ -3.04
COL12A1Q99715 RNA5SP225-201ENST00000410874 135 ntBASIC-3.96□□□□□ -3.04
COL12A1Q99715 MIR3128-201ENST00000581957 66 ntBASIC-3.96□□□□□ -3.04
COL12A1Q99715 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.97□□□□□ -3.05
COL12A1Q99715 AL117351.2-201ENST00000513571 157 ntBASIC-3.98□□□□□ -3.05
COL12A1Q99715 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.98□□□□□ -3.05
COL12A1Q99715 RNU6-573P-201ENST00000383938 106 ntBASIC-3.98□□□□□ -3.05
COL12A1Q99715 SNORD11.1-201ENST00000459482 85 ntBASIC-3.98□□□□□ -3.05
COL12A1Q99715 MIR1302-1-201ENST00000637932 143 ntBASIC-3.98□□□□□ -3.05
COL12A1Q99715 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.99□□□□□ -3.05
COL12A1Q99715 MIR3688-2-201ENST00000636963 87 ntBASIC-3.99□□□□□ -3.05
COL12A1Q99715 RNU6-1137P-201ENST00000517073 99 ntBASIC-4.01□□□□□ -3.05
COL12A1Q99715 SNORD42.2-201ENST00000365570 69 ntBASIC-4.02□□□□□ -3.05
COL12A1Q99715 SNORA20.1-201ENST00000364790 130 ntBASIC-4.02□□□□□ -3.05
COL12A1Q99715 RNU6-1168P-201ENST00000390831 104 ntBASIC-4.02□□□□□ -3.05
COL12A1Q99715 RNY3P1-201ENST00000365085 102 ntBASIC-4.03□□□□□ -3.05
COL12A1Q99715 Y_RNA.350-201ENST00000365409 98 ntBASIC-4.03□□□□□ -3.05
COL12A1Q99715 Y_RNA.574-201ENST00000384766 95 ntBASIC-4.04□□□□□ -3.06
COL12A1Q99715 MIR1277-201ENST00000408536 78 ntBASIC-4.05□□□□□ -3.06
COL12A1Q99715 RNU6-1023P-201ENST00000516137 106 ntBASIC-4.05□□□□□ -3.06
COL12A1Q99715 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.06□□□□□ -3.06
COL12A1Q99715 Y_RNA.160-201ENST00000363677 92 ntBASIC-4.06□□□□□ -3.06
COL12A1Q99715 U4.5-201ENST00000617137 123 ntBASIC-4.06□□□□□ -3.06
COL12A1Q99715 AC069439.1-201ENST00000494739 167 ntBASIC-4.08□□□□□ -3.06
COL12A1Q99715 MIR548F4-201ENST00000408515 105 ntBASIC-4.1□□□□□ -3.07
COL12A1Q99715 RNU6-875P-201ENST00000516488 106 ntBASIC-4.1□□□□□ -3.07
COL12A1Q99715 MTATP6P25-201ENST00000574491 261 ntBASIC-4.1□□□□□ -3.07
COL12A1Q99715 RNU6-474P-201ENST00000384243 107 ntBASIC-4.12□□□□□ -3.07
COL12A1Q99715 RNU7-200P-201ENST00000516105 62 ntBASIC-4.12□□□□□ -3.07
COL12A1Q99715 RNU6-718P-201ENST00000516166 105 ntBASIC-4.13□□□□□ -3.07
COL12A1Q99715 AC134503.1-201ENST00000633048 54 ntBASIC-4.13□□□□□ -3.07
COL12A1Q99715 Y_RNA.694-201ENST00000516677 117 ntBASIC-4.15□□□□□ -3.07
COL12A1Q99715 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.16□□□□□ -3.08
COL12A1Q99715 MIR3908-201ENST00000579798 126 ntBASIC-4.16□□□□□ -3.08
COL12A1Q99715 AC062037.2-201ENST00000610137 73 ntBASIC-4.18□□□□□ -3.08
COL12A1Q99715 AL365222.1-201ENST00000614661 98 ntBASIC-4.18□□□□□ -3.08
COL12A1Q99715 RNA5SP89-201ENST00000410300 108 ntBASIC-4.19□□□□□ -3.08
COL12A1Q99715 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.19□□□□□ -3.08
COL12A1Q99715 RNU6-22P-201ENST00000384355 107 ntBASIC-4.2□□□□□ -3.08
COL12A1Q99715 RNU6-346P-201ENST00000516288 111 ntBASIC-4.21□□□□□ -3.08
COL12A1Q99715 RNU6-919P-201ENST00000516731 104 ntBASIC-4.23□□□□□ -3.09
COL12A1Q99715 RNU2-16P-201ENST00000410712 136 ntBASIC-4.23□□□□□ -3.09
COL12A1Q99715 MIR3171-201ENST00000584270 74 ntBASIC-4.23□□□□□ -3.09
COL12A1Q99715 Y_RNA.388-201ENST00000383919 113 ntBASIC-4.23□□□□□ -3.09
COL12A1Q99715 RNY1P5-201ENST00000383890 115 ntBASIC-4.26□□□□□ -3.09
COL12A1Q99715 MTATP8P1-201ENST00000467115 207 ntBASIC-4.26□□□□□ -3.09
COL12A1Q99715 Y_RNA.138-201ENST00000363462 102 ntBASIC-4.27□□□□□ -3.09
COL12A1Q99715 RNU6-886P-201ENST00000384319 105 ntBASIC-4.27□□□□□ -3.09
COL12A1Q99715 Y_RNA.489-201ENST00000384410 101 ntBASIC-4.27□□□□□ -3.09
COL12A1Q99715 Y_RNA.369-201ENST00000365568 117 ntBASIC-4.27□□□□□ -3.09
COL12A1Q99715 Y_RNA.318-201ENST00000365131 97 ntBASIC-4.29□□□□□ -3.1
COL12A1Q99715 MIR5582-201ENST00000579697 68 ntBASIC-4.3□□□□□ -3.1
COL12A1Q99715 RNU6-584P-201ENST00000410350 95 ntBASIC-4.3□□□□□ -3.1
COL12A1Q99715 SNORD73B-201ENST00000364394 72 ntBASIC-4.31□□□□□ -3.1
COL12A1Q99715 RNU6-1154P-201ENST00000391001 104 ntBASIC-4.31□□□□□ -3.1
COL12A1Q99715 MIR620-201ENST00000385232 95 ntBASIC-4.33□□□□□ -3.1
COL12A1Q99715 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.34□□□□□ -3.1
COL12A1Q99715 Y_RNA.149-201ENST00000363558 117 ntBASIC-4.35□□□□□ -3.11
COL12A1Q99715 RNY4P29-201ENST00000410801 97 ntBASIC-4.35□□□□□ -3.11
COL12A1Q99715 RNU4-37P-201ENST00000410214 84 ntBASIC-4.36□□□□□ -3.11
COL12A1Q99715 AP001094.1-201ENST00000579805 193 ntBASIC-4.36□□□□□ -3.11
COL12A1Q99715 Y_RNA.193-201ENST00000363979 102 ntBASIC-4.36□□□□□ -3.11
COL12A1Q99715 Y_RNA.216-201ENST00000364205 93 ntBASIC-4.4□□□□□ -3.11
COL12A1Q99715 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.4□□□□□ -3.11
COL12A1Q99715 MIR1302-4-201ENST00000408701 150 ntBASIC-4.4□□□□□ -3.11
COL12A1Q99715 SNORD20-201ENST00000384550 80 ntBASIC-4.4□□□□□ -3.11
COL12A1Q99715 RNU6-313P-201ENST00000516317 112 ntBASIC-4.42□□□□□ -3.12
COL12A1Q99715 MT-TD-201ENST00000387419 68 ntBASIC-4.42□□□□□ -3.12
COL12A1Q99715 MIR4795-201ENST00000584182 89 ntBASIC-4.42□□□□□ -3.12
COL12A1Q99715 RNU6-215P-201ENST00000365169 102 ntBASIC-4.44□□□□□ -3.12
COL12A1Q99715 MTCYBP9-201ENST00000431021 303 ntBASIC-4.44□□□□□ -3.12
COL12A1Q99715 AC008737.2-201ENST00000599446 118 ntBASIC-4.46□□□□□ -3.12
COL12A1Q99715 RNU6-44P-201ENST00000384045 107 ntBASIC-4.47□□□□□ -3.12
COL12A1Q99715 RNU6-1160P-201ENST00000384546 104 ntBASIC-4.48□□□□□ -3.13
COL12A1Q99715 RNU6-388P-201ENST00000517012 105 ntBASIC-4.48□□□□□ -3.13
COL12A1Q99715 RNU6-389P-201ENST00000517048 105 ntBASIC-4.48□□□□□ -3.13
COL12A1Q99715 MIR568-201ENST00000385036 95 ntBASIC-4.49□□□□□ -3.13
COL12A1Q99715 MIR4719-201ENST00000585233 84 ntBASIC-4.49□□□□□ -3.13
COL12A1Q99715 MIR3974-201ENST00000637126 96 ntBASIC-4.51□□□□□ -3.13
COL12A1Q99715 Y_RNA.703-201ENST00000516846 111 ntBASIC-4.55□□□□□ -3.14
COL12A1Q99715 Y_RNA.717-201ENST00000517106 92 ntBASIC-4.57□□□□□ -3.14
COL12A1Q99715 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-4.58□□□□□ -3.14
COL12A1Q99715 MT-TG-201ENST00000387429 68 ntBASIC-4.63□□□□□ -3.15
COL12A1Q99715 MIR3133-201ENST00000583157 78 ntBASIC-4.63□□□□□ -3.15
COL12A1Q99715 MIR606-201ENST00000384851 96 ntBASIC-4.63□□□□□ -3.15
COL12A1Q99715 MTCYBP6-201ENST00000441810 138 ntBASIC-4.69□□□□□ -3.16
COL12A1Q99715 MIR4503-201ENST00000582187 83 ntBASIC-4.69□□□□□ -3.16
COL12A1Q99715 RNU6-738P-201ENST00000384531 106 ntBASIC-4.71□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms