Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 Y_RNA.619-201ENST00000410951 90 ntBASIC-5.34□□□□□ -3.26
SCAPERQ9BY12 Y_RNA.149-201ENST00000363558 117 ntBASIC-5.35□□□□□ -3.27
SCAPERQ9BY12 MTND5P20-201ENST00000448677 143 ntBASIC-5.38□□□□□ -3.27
SCAPERQ9BY12 Y_RNA.607-201ENST00000410597 98 ntBASIC-5.4□□□□□ -3.27
SCAPERQ9BY12 AL117187.1-201ENST00000555482 181 ntBASIC-5.4□□□□□ -3.27
SCAPERQ9BY12 Y_RNA.343-201ENST00000365354 112 ntBASIC-5.43□□□□□ -3.28
SCAPERQ9BY12 Y_RNA.702-201ENST00000516843 96 ntBASIC-5.43□□□□□ -3.28
SCAPERQ9BY12 Y_RNA.273-201ENST00000364703 102 ntBASIC-5.44□□□□□ -3.28
SCAPERQ9BY12 MIR548H4-201ENST00000408689 111 ntBASIC-5.44□□□□□ -3.28
SCAPERQ9BY12 RNU6-979P-201ENST00000383896 107 ntBASIC-5.45□□□□□ -3.28
SCAPERQ9BY12 MTND5P41-201ENST00000517498 206 ntBASIC-5.45□□□□□ -3.28
SCAPERQ9BY12 Y_RNA.422-201ENST00000384054 114 ntBASIC-5.47□□□□□ -3.28
SCAPERQ9BY12 RNU6-940P-201ENST00000363433 104 ntBASIC-5.48□□□□□ -3.29
SCAPERQ9BY12 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.48□□□□□ -3.29
SCAPERQ9BY12 RNU6-916P-201ENST00000516088 109 ntBASIC-5.48□□□□□ -3.29
SCAPERQ9BY12 RNU6-687P-201ENST00000516443 89 ntBASIC-5.48□□□□□ -3.29
SCAPERQ9BY12 MIR3938-201ENST00000582157 103 ntBASIC-5.48□□□□□ -3.29
SCAPERQ9BY12 MIR548X-201ENST00000580069 75 ntBASIC-5.49□□□□□ -3.29
SCAPERQ9BY12 RNU6-675P-201ENST00000384236 104 ntBASIC-5.5□□□□□ -3.29
SCAPERQ9BY12 MALAT1.1-201ENST00000618249 95 ntBASIC-5.51□□□□□ -3.29
SCAPERQ9BY12 RNU6-411P-201ENST00000384451 107 ntBASIC-5.52□□□□□ -3.29
SCAPERQ9BY12 RNU6-255P-201ENST00000516957 105 ntBASIC-5.52□□□□□ -3.29
SCAPERQ9BY12 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.52□□□□□ -3.29
SCAPERQ9BY12 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.53□□□□□ -3.29
SCAPERQ9BY12 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.53□□□□□ -3.29
SCAPERQ9BY12 MIR1302-3-201ENST00000408128 138 ntBASIC-5.53□□□□□ -3.29
SCAPERQ9BY12 AC026407.1-201ENST00000518369 204 ntBASIC-5.53□□□□□ -3.29
SCAPERQ9BY12 MIR3134-201ENST00000579433 74 ntBASIC-5.55□□□□□ -3.3
SCAPERQ9BY12 RNU6-200P-201ENST00000364743 107 ntBASIC-5.57□□□□□ -3.3
SCAPERQ9BY12 MIR3908-201ENST00000579798 126 ntBASIC-5.57□□□□□ -3.3
SCAPERQ9BY12 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.57□□□□□ -3.3
SCAPERQ9BY12 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.58□□□□□ -3.3
SCAPERQ9BY12 MTCYBP6-201ENST00000441810 138 ntBASIC-5.58□□□□□ -3.3
SCAPERQ9BY12 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.59□□□□□ -3.3
SCAPERQ9BY12 RNU6-907P-201ENST00000390924 102 ntBASIC-5.59□□□□□ -3.3
SCAPERQ9BY12 AL353621.2-201ENST00000605340 133 ntBASIC-5.59□□□□□ -3.3
SCAPERQ9BY12 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.6□□□□□ -3.31
SCAPERQ9BY12 RNU6-663P-201ENST00000391105 106 ntBASIC-5.6□□□□□ -3.31
SCAPERQ9BY12 MTCYBP9-201ENST00000431021 303 ntBASIC-5.62□□□□□ -3.31
SCAPERQ9BY12 SNORA25.4-201ENST00000363666 124 ntBASIC-5.63□□□□□ -3.31
SCAPERQ9BY12 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.63□□□□□ -3.31
SCAPERQ9BY12 RNU6-1160P-201ENST00000384546 104 ntBASIC-5.64□□□□□ -3.31
SCAPERQ9BY12 SNORA40.13-201ENST00000516379 120 ntBASIC-5.65□□□□□ -3.31
SCAPERQ9BY12 SNORD116-14-201ENST00000383894 92 ntBASIC-5.65□□□□□ -3.31
SCAPERQ9BY12 SNORD116-17-201ENST00000383929 92 ntBASIC-5.65□□□□□ -3.31
SCAPERQ9BY12 SNORD116-15-201ENST00000384445 92 ntBASIC-5.65□□□□□ -3.31
SCAPERQ9BY12 SNORD116-19-201ENST00000384729 92 ntBASIC-5.65□□□□□ -3.31
SCAPERQ9BY12 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.66□□□□□ -3.32
SCAPERQ9BY12 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.66□□□□□ -3.32
SCAPERQ9BY12 AC008737.2-201ENST00000599446 118 ntBASIC-5.66□□□□□ -3.32
SCAPERQ9BY12 RNU7-200P-201ENST00000516105 62 ntBASIC-5.67□□□□□ -3.32
SCAPERQ9BY12 AC044792.1-201ENST00000593294 196 ntBASIC-5.67□□□□□ -3.32
SCAPERQ9BY12 MIR568-201ENST00000385036 95 ntBASIC-5.68□□□□□ -3.32
SCAPERQ9BY12 MIR4712-201ENST00000583750 82 ntBASIC-5.68□□□□□ -3.32
SCAPERQ9BY12 MIR548AL-201ENST00000578416 97 ntBASIC-5.69□□□□□ -3.32
SCAPERQ9BY12 MIR1245B-201ENST00000636115 69 ntBASIC-5.69□□□□□ -3.32
SCAPERQ9BY12 Y_RNA.489-201ENST00000384410 101 ntBASIC-5.7□□□□□ -3.32
SCAPERQ9BY12 RNU6-844P-201ENST00000517175 102 ntBASIC-5.7□□□□□ -3.32
SCAPERQ9BY12 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.71□□□□□ -3.32
SCAPERQ9BY12 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.74□□□□□ -3.33
SCAPERQ9BY12 Y_RNA.535-201ENST00000384612 99 ntBASIC-5.74□□□□□ -3.33
SCAPERQ9BY12 MIR4511-201ENST00000582784 87 ntBASIC-5.74□□□□□ -3.33
SCAPERQ9BY12 RNU6-634P-201ENST00000459134 106 ntBASIC-5.75□□□□□ -3.33
SCAPERQ9BY12 IGLL4P-201ENST00000614590 133 ntBASIC-5.76□□□□□ -3.33
SCAPERQ9BY12 RNU6-627P-201ENST00000364032 102 ntBASIC-5.77□□□□□ -3.33
SCAPERQ9BY12 AL031737.1-201ENST00000450125 223 ntBASIC-5.77□□□□□ -3.33
SCAPERQ9BY12 MIR5588-201ENST00000581890 63 ntBASIC-5.77□□□□□ -3.33
SCAPERQ9BY12 AC103706.3-201ENST00000636297 85 ntBASIC-5.77□□□□□ -3.33
SCAPERQ9BY12 Y_RNA.193-201ENST00000363979 102 ntBASIC-5.78□□□□□ -3.33
SCAPERQ9BY12 MIR548S-201ENST00000581352 82 ntBASIC-5.78□□□□□ -3.33
SCAPERQ9BY12 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.8□□□□□ -3.34
SCAPERQ9BY12 SNORD30.1-201ENST00000391309 70 ntBASIC-5.8□□□□□ -3.34
SCAPERQ9BY12 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.82□□□□□ -3.34
SCAPERQ9BY12 RNU6-959P-201ENST00000384671 107 ntBASIC-5.83□□□□□ -3.34
SCAPERQ9BY12 MIR606-201ENST00000384851 96 ntBASIC-5.83□□□□□ -3.34
SCAPERQ9BY12 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.83□□□□□ -3.34
SCAPERQ9BY12 RNU6-589P-201ENST00000516485 107 ntBASIC-5.83□□□□□ -3.34
SCAPERQ9BY12 RNU6-808P-201ENST00000391233 108 ntBASIC-5.84□□□□□ -3.34
SCAPERQ9BY12 RNU6-886P-201ENST00000384319 105 ntBASIC-5.85□□□□□ -3.35
SCAPERQ9BY12 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.86□□□□□ -3.35
SCAPERQ9BY12 RNU6-346P-201ENST00000516288 111 ntBASIC-5.86□□□□□ -3.35
SCAPERQ9BY12 MIR450A1-201ENST00000362262 91 ntBASIC-5.87□□□□□ -3.35
SCAPERQ9BY12 MIR488-201ENST00000365739 83 ntBASIC-5.87□□□□□ -3.35
SCAPERQ9BY12 RNU7-171P-201ENST00000459581 62 ntBASIC-5.87□□□□□ -3.35
SCAPERQ9BY12 RNY1P5-201ENST00000383890 115 ntBASIC-5.9□□□□□ -3.35
SCAPERQ9BY12 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.91□□□□□ -3.36
SCAPERQ9BY12 Y_RNA.593-201ENST00000410292 98 ntBASIC-5.91□□□□□ -3.36
SCAPERQ9BY12 AL117351.2-201ENST00000513571 157 ntBASIC-5.91□□□□□ -3.36
SCAPERQ9BY12 U7.4-201ENST00000614961 63 ntBASIC-5.91□□□□□ -3.36
SCAPERQ9BY12 MIR4679-1-201ENST00000637619 75 ntBASIC-5.92□□□□□ -3.36
SCAPERQ9BY12 Y_RNA.506-201ENST00000384494 102 ntBASIC-5.95□□□□□ -3.36
SCAPERQ9BY12 AC090425.1-201ENST00000610007 140 ntBASIC-5.96□□□□□ -3.36
SCAPERQ9BY12 RNU4-33P-201ENST00000364316 85 ntBASIC-5.97□□□□□ -3.36
SCAPERQ9BY12 RNU6-738P-201ENST00000384531 106 ntBASIC-5.97□□□□□ -3.36
SCAPERQ9BY12 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-5.98□□□□□ -3.37
SCAPERQ9BY12 Y_RNA.261-201ENST00000364631 102 ntBASIC-5.99□□□□□ -3.37
SCAPERQ9BY12 RNU6-209P-201ENST00000384118 107 ntBASIC-5.99□□□□□ -3.37
SCAPERQ9BY12 Y_RNA.61-201ENST00000362835 102 ntBASIC-6□□□□□ -3.37
SCAPERQ9BY12 MIR4503-201ENST00000582187 83 ntBASIC-6□□□□□ -3.37
SCAPERQ9BY12 RNU6-1056P-201ENST00000383996 107 ntBASIC-6.01□□□□□ -3.37
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms